山东近海牙鲆(Paralichthys olivaceus)自然和养殖群体10个微卫星基因座位的遗传多态性分析   总被引：26，自引：7，他引：26  

王伟  尤锋  高天翔  张培军 《海洋与湖沼》2004,35(6):530-537

采用微卫星遗传标记技术对山东近海牙鲆自然群体和养殖群体的遗传多样性进行了研究。实验所用牙鲆于2003年5月分别采自山东近海和青岛胶南养鱼场，各20尾，取全血或肌肉组织，以酚-仿抽提方法提取基因组DNA，利用筛选获得的10对微卫星引物进行PCR扩增，反应产物经8％非变性聚丙烯酰胺凝胶电泳分离、EB显色，用ImageMasterl D Elite(Version 3．01)软件分析电泳结果，并计算了相应的遗传学参数。结果表明，在自然和养殖群体中，10个基因座位的等位基因平均数(α)分别为6．7和6．1，每个基因座位有效等位基因数(αe)分别为1．8—6．8和2．5—6．7，群体平均杂合度(H)分别为0．8120和0．7310；两个群体间的遗传相似性系数、遗传距离和基因分化系数为0．8558、0．1557和0．0558；自然群体内每个座位上的多态信息含量(PIC)为0．59—0．84、个体识别率(DP)为0．54—0．86、非父排除率(PPE)为0．41—0．72，其累积个体识别率和非父排除率均达到0．9999，表明所选座位属中高识别力的遗传标记，可以将它们应用于今后牙鲆雌核发育群体的遗传变异分析以及进一步的遗传育种的研究中。  相似文献   

中华乌塘鳢的群体生物学研究 Ⅱ.生化遗传变异     

李刚 《热带海洋学报》1991,(2)

用同工酶谱法发现中华乌塘鳢Bostrichthy sinensis四个群体的遗传变异水平很低,在所检测的30个基因座位中,多态座位比例只有0—10％,平均杂合度仅为0.2—0.5％,物种的平均杂合度为0.33±0.10％。四个群体共享常见的等位基因。虽然其中三个群体拥有特有的等位基因,但其基因频率都未超过5％。四个群体的Nei氏遗传距只有1.68—12.13×10~(-5)。据分析,近交可能是遗传变异水平低和形态特征分化差的主要原因。种苗生产上应注意广泛采集不同地理群体的鱼作亲鱼,以丰富养殖群体的基因库。  相似文献   

Trends in biomass, density and diversity of North Sea macrofauna   总被引：6，自引：2，他引：6  

Heip  C.; Basford  D.; Craeymeersch  J. A.; Dewarumez  J. M.; Dorjes  J.; de Wilde  P.; Duineveld  G.; Eleftheriou  A.; Herman  P. M. J.; Niermann  U.; Kingston  P.; Kunitzer  A.; Rachor  E.; Rumohr  H.; Soetaert  K.; Soltwedel  T. 《ICES Journal of Marine Science》1992,49(1):13-22

  相似文献   

Microbial Diversity in Nankai Trough Sediments at a Depth of 3,843 m   总被引：6，自引：0，他引：6  

Lina Li  Jean Guenzennec  Peter Nichols  Pierre Henry  Miki Yanagibayashi  Chiaki Kato 《Journal of Oceanography》1999,55(5):635-642

Dense populations of bivalves, primarily Calyptogena sp., were observed at cold seeps of the Nankai Trough. Bacterial input to the sediment was estimated through determination of phospholipid ester-linked fatty acid (PLFA) and DNA profiles. Results indicated a bacterial biomass of 10⁹ cells (g dry wt)^-1 while individual fatty acid profiles revealed a predominance of monounsaturated fatty acids, mainly 18:1 isomers. The presence of these fatty acids can be interpreted to reflect a response to low temperature and a predominance of psychrophilic bacteria. DNA fragments encoding bacterial ribosomal RNA small-subunit sequences (16S rDNA) were amplified by the polymerase chain reaction method using DNA extracted directly from the sediment samples. From the sequencing results, at least 19 kinds of bacterial 16S rDNAs related to mostly the Proteobacteria and a few gram-positive bacteria were identified. These results suggest that the bacterial community in the Nankai Trough sediments consists of mainly bacteria belonging to the Proteobacteria , , and subdivisions. Bacteria belonging to the and subdivisions, which are known to include epibiont and sulfate reducing bacteria, respectively, were mostly detected in the sediment obtained from inside the area of the Calyptogena community, and the -Proteobacteria may function to supply reduced sulfur to bacterial endosymbionts of Calyptogena.  相似文献   

绒螯蟹种质资源研究进展   总被引：1，自引：1，他引：1  

张秀梅  柳广东  高天翔 《中国海洋大学学报(自然科学版)》2002,32(4):533-542

本文综述了近年来有关绒螯蟹属在形态学、遗传学和育种学方面的研究进展 ,着重介绍了同工酶、RAPD和 mt DNA技术在绒螯蟹群体遗传学中的应用 ,提出遗传学分类标准的建立是绒螯蟹属分子分类的关键所在。  相似文献   

Molecular identification of bloom-forming species Phaeocystis globosa (Pryninesiophyta) and its dispersal based on rDNA ITS sequence analysis     

Chen Yueqin  Shao Peng  Wang Ning  Zhou Hui  Qu Lianghu  Linda K. Medlin 《海洋学报(英文版)》2003,22(2):243-253

The colony-forming Phaeocystis species are causative agents of dense bloom occurrences in coastal waters worldwide. It is difficult to separate them because of the different morphologies associated with their colonial stages. In this study we applied molecular approaches to analyze the genetic variation of Phaeocystis globosa and Phaeocystis pouchetii from several geographic regions, and to assist in tracing the dispersal of bloom-forming Phaeocystis species in coastal waters of China. The sequences of the internal transcribed spacers (ITS1 and ITS2) of rDNA and the 5.8S ribosomal RNA gene of Phaeocystis strains were determined. Sequence comparison shows that P.globosa was the most divergent to P. pouchetii, exhibiting sequence divergence higher than 0.08. However, lower genetic divergences existed between strains of P.globosa. The sequence comparison of the Phaeocystis rDNA ITS clearly shows that the species isolated from the southeast coast of China is identified as P.globosa rather than P. cf. pouchetii or other species. Furthermore, the significance of rDNA variation in distinct global populations of P.globosa suggested it might have had sufficient time to accumulate detectable mutations at the rDNA locus, supporting the hypothesis of ancient dispersal of P.globosa to many areas, meaning that P.globosa blooms in the coastal waters of China are endemic rather than a newly introduced species or a foreign source. Finally, based on the high divergent region of rDNA ITS, a pair of species-specific primers for P.globosa were designed, they could be useful to detect the presence of this species in mixed plankton assemblages or flagellate stages that are recognized with diffculties by means of conventional microscopy.  相似文献   

花尾胡椒鲷养殖群体遗传多样性的等位酶研究   总被引：5，自引：1，他引：5  

丁少雄  王军  苏永全  全成干  张纹  郭丰  马梁 《台湾海峡》2001,20(2):224-227,T002

应用聚丙烯酰胺凝胶电泳（PAGE）技术对取自厦门火烧屿海水网箱的花尾胡椒鲷人工鱼养殖群体的遗传多样性进行等位酶分析。结果表明：所检测的16种同工酶的24个基因座位中，在XDH和GCDH基因座位上发现多态性，其平均多态位点比例为8．33％，基因座位有效等位基因的平均数Ne为1.083，平均杂合度的观测值Ho为0．00556，预期值He为0．00537,Hardy-Weinberg遗传偏离指数（D)为0．035。与其他鱼类相比较说明了其遗传多样性处于较低水平，文中对此进行了探讨并提出相应的种质资源管理保护措施。  相似文献   

Geoacoustic Inversion via Genetic Algorithm and Its Application to Manganese Sediment Identification     

Woojae Seong  Cheolsoo Park 《Marine Georesources & Geotechnology》2001,19(1):37-50

An acoustic inversion method using a wide-band signal and two near field receivers is proposed and applied to multiple layered seabed models including a manganese sediment. The inversion problem can be formulated into a probabilistic model comprised of signals, a forward model, and additive noise. The forward model simulates wide-band signals, such as chirp signals, and is chosen to be the source-waveletconvolution plane wave modeling method. The wavelet matching technique, using weighted least-squares fitting, estimates the sediment sound-speed and thickness on which determination of the possible numerical ranges for a priori uniform distribution is based. The genetic algorithm is applied to a global optimization problem to find a maximum a posteriori solution for determined a priori search space. Here the object function is defined by an L 2 norm of the difference between measured and modeled signals. Not only the marginal pdf but also its statistics are calculated by numerical evaluation of integrals using the samples selected during importance sampling process of the genetic algorithm.  相似文献   

Mooring optimization of floating platforms using a genetic algorithm   总被引：1，自引：0，他引：1  

Mehdi Shafieefar  Aidin Rezvani 《Ocean Engineering》2007,34(10):1413-1421

This paper presents a new procedure for the optimization of the mooring design of floating platforms, in which an automatic design sequence is also established. Regarding the optimization philosophy, the following aspects are dealt with:

• The optimization of the platform heading and its mooring pattern, taking into account the environmental force spreading;

• optimum line length or line tension for each mooring line, associated to the optimization of the mooring line materials and sizes.

Basically, the main goal of this paper is to introduce a new method, which will provide the quickest way to find the best mooring system, defined here as that which minimizes platform responses.A genetic algorithm (GA) is applied in this contribution, and this paper describes exactly the procedure of developing a GA code directed toward the solution of mooring design optimization problems. In order to prove the efficiency and the vast potential of the proposed algorithm as a design tool, sample moorings are analyzed for different environmental conditions and the final results, including the time required to run them, are presented.  相似文献   

Distribution and Diversity of Ibla cumingi Darwin [Crustacea, Cirripedia) from the Gulf of Elat (Red Sea)     

Y. Achituv  W. Klepal 《Marine Ecology》1981,2(4):295-305

Abstract. The distribution of Ibla cumingi DARWIN on different types of hard substrata along 30 km of coast in the Gulf of Elat was studied. I. cumingi was found among and underneath Tetraclita squamosa rufotincta , in oyster beds, underneath slabs of beachrock, and in fissures in igneous rocks. In the Tetraclita belt, I. cumingi is most frequent in empty shells of dead Tetraclita while in the oyster bed it is common inside the meshwork made by the oysters. The distribution is regarded as clustered distribution. The density and size of the clusters of I. cumingi is determined by the available sheltered space within the midlittoral zone. The form of the habitat determines the shape of the animals. Those found in the oyster bed and fissures are usually longer than those found in the Tetraclita belt due to the depth of the fissures or to the bigger spaces within the oyster bed. I. cumingi is orientated so that the capitulum with the cirri is projecting towards the open water, and the water current. It is concluded that I. cumingi can withstand the physical stress encountered in a tropical intertidal zone, but that the distribution pattern is caused by predation.  相似文献